BINMAT: FOR FRAGMENT ANALYSIS DATA
Created by Clarke van Steenderen
Click the ? to view the help file:
Select a .csv file
Browse...
Check my data for unwanted values
Consolidate matrix
Download Matrix
MATRIX
SUMMARY
ERROR RATES
UPGMA TREE
nMDS PLOT
nMDS Validation
Filter data
Summary info
Download Summary
Check Error rates
Download Errors
Remove samples with a jaccard error greater than:
Remove
Select a consolidated .csv file
Browse...
Number of bootstrap replicates for clustering tree:
Create Clustering Tree
Download Clustering Tree
Upload an already consolidated binary matrix.
Select a .csv file
Browse...
Select a distance method
euclidean
maximum
manhattan
canberra
binary
minkowski
No. of dimensions (k):
PLOT nMDS
Download distance matrix
Point size
Show sample labels?
No
Yes
Download MDS Plot
Scree Plot
Shepard Plot
Download Scree Plot
Download Shepard Plot
Remove samples with peaks less than:
CHECK
Download filtered data
Download removed samples